However, secondary structure predictions revealed an identical do

However, secondary structure predictions revealed an identical domain architecture for all TraB homologues, which resembles that of FtsK: a N-terminal membrane association domain that is followed by a DNA-translocase/ATPase domain with Walker A and B boxes and a C-terminal winged helix-turn-helix fold (wHTH) (Vogelmann et al., 2011a). ATPase activity and membrane association have been experimentally confirmed for TraB proteins of various plasmids (Kosono et al., 1996; Pettis & Cohen, 1996; Reuther et al., 2006a). Inactivation APO866 in vivo of the ATP binding site of TraB from the Streptomyces nigrifaciens plasmid pSN22 demonstrated that the ATPase activity is essential for conjugative transfer (Kosono et al., 1996). The

similarity of TraB to the septal DNA translocator proteins

FtsK and SpoIIIE that direct chromosome segregation during cell division and sporulation (Bath et al., 2000; Massey et al., 2006; Bigot et al., 2007) suggests a similar function for TraB during conjugation. However, whereas FtsK translocates the DNA through a closing septum to the daughter cell/spore, TraB has to translocate the DNA through intact cell envelopes of the donor and the recipient. Because a TraB–eGFP fusion protein localized to the hyphal tips of substrate CDK inhibitor review mycelium, it was suggested that Streptomyces conjugation involves the tips (Reuther et al., 2006a). Up to now it is still unclear, whether TraB contains a membrane-targeting sequence and is directed to the tip by the membrane composition or curvature or whether TraB is recruited to the tips by Gemcitabine concentration its interaction with other proteins, for example, DivIVA (Hempel et al., 2008; Lenarcic et al., 2009; Jyothikumar et al., 2012). Despite the toxic effects of TraB, this protein of the Streptomyces venezuelae plasmid pSVH1 could be expressed in S. lividans with an N-terminal Strep tagII sequence (Voss & Skerra, 1997) and purified (Reuther et al., 2006a). Chemical

crosslinking showed higher oligomeric structures that were also observed when the membrane association domain of TraB was eliminated. After separation of TraB oligomers from the monomer fraction by gel filtration chromatography, ring-shaped TraB particles could be detected by electron microscopy. 2D averaging of the images revealed symmetric hexamers of about 12 nm in diameter, which contained a central pore. This structure was in full agreement with a predicted TraB-DNA-translocase structure obtained by homology modelling with the Pseudomonas aeruginosa FtsK translocase domain crystal structure as a template (Vogelmann et al., 2011a). Both structures had a central pore of 3.0 and 3.1 nm, respectively, which is of sufficient size to accommodate a double-stranded DNA molecule. Conjugative transfer of DNA by direct cell to cell contact implies that the DNA has to pass the cell envelopes of donor and recipient. For Streptomyces, this means: two cytoplasmic membranes and two peptidoglycan (PG) layers.

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